Agilent 6410 Mass Spectrometer Left Angle
Agilent 6410 Side View
Certified Refurbished · Mass Spectrometry · LC/MS Systems

Agilent 6410B LC/MS with 1260 Infinity Clinical Edition HPLC




Includes:

    • Agilent 6410B LC/MS
      • ESI Source
    • Agilent 1260 Infinity Clinical Edition HPLC
      • Solvent Tray
      • HiP Degasser Clinical Edition
      • Binary Pump Clinical Edition
      • Thermostatted Column Compartment (TCC) Clinical Edition
      • HiP Autosampler Clinical Edition
      • Thermostat Clinical Edition
  • Mechanical Pump
  • Data System
  • Warranty Coverage
Verified against OEM and published benchmarks
1-year warranty available
Installation and familiarization available
Financing available

Options:

  • MS Sample Introduction
  • Generator
  • Air Compressor
  • Module Customization Available
  • Workbench
  • Wiley Registry / NIST 2023 Mass Spectral Library
  • Installation & Familiarization
  • Extended Warranty
  • Financing Available


15-Day

Refurbishment cadence

OEM-Spec

Verified against OEM and published benchmarks; report included.

On-Staff

Solution Scientists

Since 1996

Three decades supporting labs

The System

What you are buying

A refurbished Agilent 6410B Triple Quadrupole LC/MS with a 1260 Infinity HPLC front end. The 1260 pump and sampler separate the mixture and deliver a reproducible gradient to the source. The 6410’s ion source converts the eluent into gas-phase ions. The triple quadrupole isolates a precursor, fragments it, and measures the product ion at trace levels. GenTech rebuilds and tests the LC, the source, and the analyzer, then verifies the system end to end.

Every unit moves through the GenTech Certified process. Solution Scientists disassemble and inspect each module, replace all consumables and degraded wear components, then tune and calibrate the instrument and verify performance against OEM and published benchmarks using known reference chemicals. The instrument ships with its verification report. A certified-refurbished system gives you that performance without the capital cost or the lead time of a new purchase.

What Agilent says about this platform

Agilent built the 6410 for single-point control of the LC and MS from one data system, covering Agilent 1100 and 1200 Series HPLC systems paired with the 6410 itself. Autotune reaches sensitivity and resolution specifications without manual adjustment. Agilent rates MS/MS sensitivity at 0.5 picograms of reserpine injected on-column, with a signal-to-noise ratio above 20:1 across three concurrent MRM transitions. The system runs electrospray, nanospray through an HPLC-Chip Cube interface, atmospheric pressure chemical ionization, or a multimode source that runs ESI and APCI at once. Three parallel-rod quadrupole sets separate and fragment ions, which improves ion focus and cuts chemical noise. Mass resolution offers three settings, from 0.7 to 2.5 atomic mass units full width at half maximum, with mass accuracy to within 0.1 u across the range and stability under 0.1 u over 24 hours. MassHunter Workstation software controls acquisition, qualitative analysis, and quantitative analysis.

What each module does

Liquid chromatograph

Separates the mixture and delivers a reproducible gradient to the source. The 1260 Infinity front end runs the same pumps and samplers as a standalone HPLC.

Ion source

Converts the liquid eluent into gas-phase ions. Electrospray and Agilent Jet Stream handle polar and large molecules; atmospheric-pressure chemical ionization covers the less-polar compounds.

Mass analyzer

Two quadrupoles flank a collision cell. The first selects a precursor, the cell fragments it, and the second measures a product ion, which gives the selectivity and sensitivity that trace quantitation in complex matrices demands.

Vacuum and detection

Stages the ions from atmosphere to high vacuum, then counts them at the detector.

In this stack
Agilent 6410B QQQ MS with ESI Source G6410B Verified
Agilent 1260 Solvent Tray Verified
Agilent 1260 HiP Degasser Clinical Edition K4225A Verified
Agilent 1260 Binary Pump Clinical Edition K1312B Verified
Agilent 1260 TCC Clinical Edition K1316C Verified
Agilent 1260 HiP Autosampler Clinical Edition K1367E Verified
Agilent 1260 Thermostat Clinical Edition K1330B Verified
Mechanical Pump Included
Workstation with preloaded software Included
Specifications

Technical detail

Ion sources ESI, APCI, multimode, nanospray
Sensitivity 0.5 pg reserpine, >20:1 S/N (Agilent-reported)
Mass resolution 0.7 to 2.5 u FWHM, 3 settings
Software MassHunter
HPLC front end 1260 Infinity HPLC Front End
Time programming Up to 99 segments, 99 MRMs each

*OEM specifications for brand new instrument.

Certification

What “GenTech Certified” means

Refurbishment at GenTech is a defined process, not a wipe-down. Every system moves through the same five stages.

1. Disassembly and rebuild. Solution Scientists strip the instrument down, clean each module inside and out, and rebuild it from the frame up. They replace pump seals, pistons, and check valves to specification.

2. Configuration and new parts. Solution Scientists install the options and modules you selected and fit new wear parts throughout. They replace the detector lamp with a new one and reset the lamp hours.

3. Diagnostic and performance testing. Solution Scientists tune and calibrate the instrument, run system diagnostics, and confirm detector wavelength accuracy. They test full-system pressure and gradient performance against OEM and published benchmarks using known reference chemicals.

4. Data package you approve before shipment. The verification data goes to you for approval before the system leaves the bench. You see exactly how the instrument performs before it ships.

5. Delivery and installation. The instrument ships in protective packing with a one-year warranty option and professional installation available from a GenTech Solution Scientist.

Application Fit

Labs that run this system

The 6410 is method-compatible across the techniques most regulated and research labs run every day. These are the application areas buyers ask about most.

Environmental

PFAS testing

EPA Method 537.1 and similar state programs require quantitation of per- and polyfluoroalkyl substances in drinking water at low parts-per-trillion levels, a sensitivity range triple quadrupole MS is built to reach.

Food & Beverage / Cannabis

Pesticides and mycotoxins

Multi-residue pesticide panels and mycotoxin screens in food and cannabis testing often cover more than 100 compounds in a single run, each requiring the selectivity a triple quadrupole provides against a complex matrix background.

Pharmaceutical

Trace impurities and cleaning validation

Pharmaceutical cleaning validation protocols confirm that equipment surfaces carry no detectable residue of the previous product, often down to sub-part-per-billion swab or rinse limits.

Clinical & Forensic

Quantitative toxicology

Forensic and clinical toxicology panels quantify drugs and metabolites in blood, urine, or tissue against legally defensible limits, where a triple quadrupole’s selectivity rules out false positives from matrix interferences.

Regulated Bioanalysis

GLP-grade quantitation

Good Laboratory Practice studies require documented, audit-ready quantitation with full method validation, a standard regulated bioanalysis labs run routinely on triple quadrupole platforms.

Condition

Refurbished

Model

G6410B, 1260Clinical Ed

OEM

Agilent Technologies

Financing

Financing Options Available

Financing Options Available.  Finance Builder.

Need a main board instead?

Replacing a failed pump or looking to upgrade your mass spec? Every component in this system is available individually, in stock and performance-verified.